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Terje Raudsepp

Associate Professor

Curriculum Vitae

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Phone: (979) 862-2879

Mailstop: 4458

Department: VIBS

Photo of Raudsepp, Terje

Education

  • Ph.D. molecular genetics, Swedish University of Agricultural Sciences 1999
  • M.S. genetics and cytology, Tartu University, Tartu, Estonia 1982

Research

  • Biomedical Genomics

Interdisciplinary Activities

  • Genetics
  • Reproductive Biology

Scholarly Interests

Comparative genomics and molecular cytogenetics of animals, birds and other vertebrates organization, function and evolution of sex chromosomes; equine genomics - genomics of genetic diseases and disorders of sexual development and reproduction; alpaca and camelid genomics.

Publications

A comprehensive whole genome integrated cytogenetic map for the alpaca (Lama pacos)
Avila F, Baily MP, Perelman P, Das PJ, Pontius J, Chowdhary R, Owens E, Johnson WE, Merriwether DA, Raudsepp T
Cytogenetics and Genome Research .
Repeated Early Embryonic Loss in a Thoroughbred Mare with a Chromosomal Translocation [64,XX,t(2;13)].
Lear TL, Raudsepp T, Lundquist JM, Brown SE
J Equine Vet Sci, 34, 805–809.
Contribution of DNA copy number variants to equine cryptorchidism
Ghosh S, Das PJ, Arnold C, Jaxheimer J, Varner DD, Chowdhary BP, Raudsepp T
Journal of Equine Veterinary Science 34, 29.
Reshaping antibody diversity.
Wang, F., Ekiert. D.E., Ahmad, I., Li, W., Zhang, Y., Bazirgan, O., Torkamani, A., Raudsepp, T., Waithaka, M, Criscitiello, M.F., Wilson, I.A., Schultz, P.G., Vaughn V. Smider, V.V.
Cell 153, 1379–1393. Received journal COVER..
Copy number variation in the horse genome.
Ghosh S, Qu Z, Das PJ, Fang E, Juras R, Cothran EG, McDonell S, Kenney DG, Lear TL, Adelson DL, Chowdhary BP, Raudsepp T
PLoS Genet. 10(10):e1004712.
Male horse meiosis: metaphase I chromosome configuration and chiasmata distribution.
Al-Jaru A, Goodwin W, Skidmore J, Raudsepp T, Khazanehdari K
Cytogenet Genome Res. 143(4):225-31.
Comparative analysis of mammalian Y chromosomes illuminates ancestral structure and lineage-specific evolution.
Li G, Davis BW, Raudsepp T, Pearks Wilkerson AJ, Mason VC, Ferguson-Smith M, O'Brien PC, Waters PD, Murphy WJ
Genome Res. 23(9):1486-95.
Comparative organization and gene expression profiles of the porcine pseudoautosomal region.
Das PJ, Mishra DK, Ghosh S, Avila F, Johnson GA, Chowdhary BP, Raudsepp T
Cytogenet Genome Res. 141(1):26-36.
A multi-platform draft de novo genome assembly and comparative analysis for the Scarlet Macaw (Ara macao).
Seabury CM, Dowd SE, Seabury PM, Raudsepp T, Brightsmith DJ, Liboriussen P, Halley Y, Fisher CA, Owens E, Viswanathan G, Tizard IR
PLoS One. 8(5):e62415.
Stallion sperm transcriptome comprises functionally coherent coding and regulatory RNAs as revealed by microarray analysis and RNA-seq.
Das PJ, McCarthy F, Vishnoi M, Paria N, Gresham C, Li G, Kachroo P, Sudderth AK, Teague S, Love CC, Varner DD, Chowdhary BP, Raudsepp T
PLoS One. 8(2):e56535.
Genome-wide association study implicates testis-sperm specific FKBP6 as a susceptibility locus for impaired acrosome reaction in stallions.
Raudsepp T, McCue ME, Das PJ, Dobson L, Vishnoi M, Fritz KL, Schaefer R, Rendahl AK, Derr JN, Love CC, Varner DD, Chowdhary BP
PLoS Genet. 8(12):e1003139.
A high-resolution radiation hybrid map of the river buffalo major histocompatibility complex and comparison with BoLA.
Stafuzza NB, Greco AJ, Grant JR, Abbey CA, Gill CA, Raudsepp T, Skow LC, Womack JE, Riggs PK, Amaral ME
Anim Genet. 44(4):369-76.
Development and application of camelid molecular cytogenetic tools.
Avila F, Das PJ, Kutzler M, Owens E, Perelman P, Rubes J, Hornak M, Johnson WE, Raudsepp T
J Hered. 105(6):858-69.
Ovarian dysgenesis in an alpaca with a minute chromosome 36.
Fellows E, Kutzler M, Avila F, Das PJ, Raudsepp T
J Hered. 105(6):870-4.
A gene catalogue of the euchromatic male-specific region of the horse Y chromosome: comparison with human and other mammals.
Paria N, Raudsepp T, Pearks Wilkerson AJ, O'Brien PC, Ferguson-Smith MA, Love CC, Arnold C, Rakestraw P, Murphy WJ, Chowdhary BP
PLoS One. 6(7):e21374.
Total RNA isolation from stallion sperm and testis biopsies.
Das PJ, Paria N, Gustafson-Seabury A, Vishnoi M, Chaki SP, Love CC, Varner DD, Chowdhary BP, Raudsepp T
Theriogenology. 74(6):1099-1106, 1106e1-2.
The 450-band resolution G- and R-banded standard karyotype of the donkey (Equus asinus, 2n = 62).
Di Meo GP, Perucatti A, Peretti V, Incarnato D, Ciotola F, Liotta L, Raudsepp T, Di Berardino D, Chowdhary B, Iannuzzi L
Cytogenet Genome Res. 125(4):266-71.
Genetics of Sex-linked yellow in the Syrian hamster.
Alizadeh A, Hong LZ, Kaelin CB, Raudsepp T, Manuel H, Barsh GS
Genetics. 181(4):1427-36.
A BAC contig map over the proximal approximately 3.3 Mb region of horse chromosome 21.
Brinkmeyer-Langford C, Raudsepp T, Gustafson-Seabury A, Chowdhary BP
Cytogenet Genome Res. 120(1-2):164-72.
Chicken CD69 and CD94/NKG2-like genes in a chromosomal region syntenic to mammalian natural killer gene complex.
Chiang HI, Zhou H, Raudsepp T, Jesudhasan PR, Zhu JJ
Immunogenetics. 59(7):603-11.
Novel gene acquisition on carnivore Y chromosomes.
Murphy WJ, Pearks Wilkerson AJ, Raudsepp T, Agarwala R, Schäffer AA, Stanyon R, Chowdhary BP
PLoS Genet. 2(3):e43.
Evolutionary movement of centromeres in horse, donkey, and zebra.
Carbone L, Nergadze SG, Magnani E, Misceo D, Francesca Cardone M, Roberto R, Bertoni L, Attolini C, Francesca Piras M, de Jong P, Raudsepp T, Chowdhary BP, Guérin G, Archidiacono N, Rocchi M, Giulotto E
Genomics. 87(6):777-82.
Single linkage group per chromosome genetic linkage map for the horse, based on two three-generation, full-sibling, crossbred horse reference families.
Swinburne JE, Boursnell M, Hill G, Pettitt L, Allen T, Chowdhary B, Hasegawa T, Kurosawa M, Leeb T, Mashima S, Mickelson JR, Raudsepp T, Tozaki T, Binns M
Genomics. 87(1):1-29.
Non-mosaic monosomy 59,X in cattle: a case report
Romano JE, Raudsepp T, Mulon PY, Villadóniga GB
Animal Reproduction Science . 156: 83–90.
A Chromosome Map of the Alpaca Genome
Terje Raudsepp
Alpaca World Magazine. Spring 2015, 22-26.
Establishment, Characterization, and Toxicological Application of Loggerhead Sea Turtle (Caretta caretta) Primary Skin Fibroblast Cell Cultures
Sarah Jean Webb, Gregory V. Zychowski, Sandy W. Bauman, Benjamin M. Higgins, Terje Raudsepp, Lauren S. Gollahon, Kimberly J. Wooten, Jennifer M. Cole, and Céline A.J. Godard-Codding
Environ. Sci. Technol. 48 (24), 14728–14737.
A cytogenetic and comparative map of camelid chromosome 36 and the minute in alpacas
Felipe Avila, Malorie P. Baily, David A. Merriwether, Vladimir A. Trifonov, Jiři Rubes, Michelle A. Kutzler, Renuka Chowdhary, Jan Janečka, Terje Raudsepp
Chromosome Research. 23:237–251.
Alpaca Chromosomes and Gene mapping
Terje Raudsepp
Alpacas Magazine. Spring 2015, 32-35.


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